Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXA2O43364 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXA2O43364 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
HOXA2O43364 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC15.32■□□□□ 0.04
HOXA2O43364 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXA2O43364 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXA2O43364 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXA2O43364 AL161772.1-201ENST00000610494 4412 ntBASIC15.32■□□□□ 0.04
HOXA2O43364 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HOXA2O43364 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.32■□□□□ 0.04
HOXA2O43364 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXA2O43364 AC021305.1-201ENST00000520656 1514 ntBASIC15.32■□□□□ 0.04
HOXA2O43364 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXA2O43364 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXA2O43364 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.32■□□□□ 0.04
HOXA2O43364 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HOXA2O43364 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.31■□□□□ 0.04
HOXA2O43364 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 RNVU1-8-201ENST00000364272 125 ntBASIC15.31■□□□□ 0.04
HOXA2O43364 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HOXA2O43364 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HOXA2O43364 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC15.31■□□□□ 0.04
HOXA2O43364 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.31■□□□□ 0.04
HOXA2O43364 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 GOLGA2P8-201ENST00000505201 779 ntBASIC15.31■□□□□ 0.04
HOXA2O43364 SLC25A15P3-201ENST00000505530 290 ntBASIC15.31■□□□□ 0.04
HOXA2O43364 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 C2orf69P1-201ENST00000563532 1093 ntBASIC15.31■□□□□ 0.04
HOXA2O43364 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.31■□□□□ 0.04
HOXA2O43364 MIR6756-201ENST00000616240 63 ntBASIC15.31■□□□□ 0.04
HOXA2O43364 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HOXA2O43364 CTBP2P8-201ENST00000422584 1330 ntBASIC15.31■□□□□ 0.04
HOXA2O43364 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.31■□□□□ 0.04
HOXA2O43364 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.31■□□□□ 0.04
HOXA2O43364 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HOXA2O43364 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 AC132872.4-202ENST00000622924 2756 ntBASIC15.3■□□□□ 0.04
HOXA2O43364 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HOXA2O43364 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HOXA2O43364 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.3■□□□□ 0.04
HOXA2O43364 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HOXA2O43364 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
HOXA2O43364 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HOXA2O43364 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HOXA2O43364 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.3■□□□□ 0.04
HOXA2O43364 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.3■□□□□ 0.04
HOXA2O43364 SHMT1P1-201ENST00000419974 1312 ntBASIC15.3■□□□□ 0.04
HOXA2O43364 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC15.3■□□□□ 0.04
HOXA2O43364 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HOXA2O43364 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.3■□□□□ 0.04
HOXA2O43364 KLF17P1-201ENST00000547105 1126 ntBASIC15.3■□□□□ 0.04
HOXA2O43364 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.3■□□□□ 0.04
HOXA2O43364 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.3■□□□□ 0.04
HOXA2O43364 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.3■□□□□ 0.04
HOXA2O43364 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms