Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.32□□□□□ -0.28
TO15178 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TO15178 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TO15178 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
TO15178 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TO15178 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.32□□□□□ -0.28
TO15178 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TO15178 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TO15178 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TO15178 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.32□□□□□ -0.28
TO15178 AC020907.1-201ENST00000616460 1350 ntBASIC13.32□□□□□ -0.28
TO15178 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TO15178 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TO15178 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TO15178 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TO15178 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TO15178 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TO15178 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TO15178 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.31□□□□□ -0.28
TO15178 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.31□□□□□ -0.28
TO15178 AC138028.6-201ENST00000616106 1482 ntBASIC13.31□□□□□ -0.28
TO15178 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TO15178 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
TO15178 AL022313.4-201ENST00000562756 2046 ntBASIC13.31□□□□□ -0.28
TO15178 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.31□□□□□ -0.28
TO15178 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
TO15178 USP17L6P-201ENST00000382470 1197 ntBASIC13.31□□□□□ -0.28
TO15178 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 GPAA1P2-201ENST00000417923 928 ntBASIC13.31□□□□□ -0.28
TO15178 AC016700.1-201ENST00000429424 312 ntBASIC13.31□□□□□ -0.28
TO15178 BX284668.4-201ENST00000453917 508 ntBASIC13.31□□□□□ -0.28
TO15178 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.31□□□□□ -0.28
TO15178 RCC2P8-201ENST00000502779 1035 ntBASIC13.31□□□□□ -0.28
TO15178 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.31□□□□□ -0.28
TO15178 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.31□□□□□ -0.28
TO15178 AC020914.3-201ENST00000594712 304 ntBASIC13.31□□□□□ -0.28
TO15178 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 AL645939.5-201ENST00000606834 243 ntBASIC13.31□□□□□ -0.28
TO15178 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.31□□□□□ -0.28
TO15178 AL157813.1-201ENST00000612996 587 ntBASIC13.31□□□□□ -0.28
TO15178 AC100757.4-201ENST00000626934 759 ntBASIC13.31□□□□□ -0.28
TO15178 AC244452.3-201ENST00000636814 210 ntBASIC13.31□□□□□ -0.28
TO15178 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TO15178 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
TO15178 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.31□□□□□ -0.28
TO15178 AC027601.5-201ENST00000624065 2482 ntBASIC13.31□□□□□ -0.28
TO15178 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TO15178 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TO15178 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TO15178 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.3□□□□□ -0.28
TO15178 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.3□□□□□ -0.28
TO15178 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TO15178 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TO15178 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TO15178 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.3□□□□□ -0.28
TO15178 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.3□□□□□ -0.28
TO15178 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.3□□□□□ -0.28
TO15178 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TO15178 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms