Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 KRT18P46-201ENST00000435568 1279 ntBASIC14.05□□□□□ -0.16
C4orf47A7E2U8 AC098934.1-203ENST00000442868 1262 ntBASIC14.05□□□□□ -0.16
C4orf47A7E2U8 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 USB1-205ENST00000561743 1135 ntTSL 3 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 CYP4F36P-201ENST00000589193 186 ntBASIC14.05□□□□□ -0.16
C4orf47A7E2U8 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 MIR600HG-201ENST00000449175 5984 ntBASIC14.05□□□□□ -0.16
C4orf47A7E2U8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.05□□□□□ -0.16
C4orf47A7E2U8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AC007686.3-201ENST00000619017 3487 ntBASIC14.04□□□□□ -0.16
C4orf47A7E2U8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 NHP2P1-201ENST00000335274 462 ntBASIC14.04□□□□□ -0.16
C4orf47A7E2U8 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 OR8T1P-201ENST00000421347 918 ntBASIC14.04□□□□□ -0.16
C4orf47A7E2U8 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 SCARNA12-201ENST00000459155 270 ntBASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AC008026.2-201ENST00000495438 348 ntBASIC14.04□□□□□ -0.16
C4orf47A7E2U8 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AC106047.2-201ENST00000511723 743 ntBASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 NAV1-210ENST00000593583 726 ntBASIC14.04□□□□□ -0.16
C4orf47A7E2U8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
C4orf47A7E2U8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms