Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AL356740.1-201ENST00000602192 1297 ntBASIC17.43■□□□□ 0.38
RGPD3A6NKT7 MDC1-209ENST00000613547 830 ntTSL 5 BASIC17.43■□□□□ 0.38
RGPD3A6NKT7 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RGPD3A6NKT7 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RGPD3A6NKT7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RGPD3A6NKT7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 AC011498.7-201ENST00000624986 2027 ntBASIC17.42■□□□□ 0.38
RGPD3A6NKT7 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 POLR3DP1-201ENST00000398689 1176 ntBASIC17.42■□□□□ 0.38
RGPD3A6NKT7 CACYBPP3-201ENST00000406011 625 ntBASIC17.42■□□□□ 0.38
RGPD3A6NKT7 HNRNPA1P68-201ENST00000425806 979 ntBASIC17.42■□□□□ 0.38
RGPD3A6NKT7 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 AC005077.3-201ENST00000449614 213 ntBASIC17.42■□□□□ 0.38
RGPD3A6NKT7 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.42■□□□□ 0.38
RGPD3A6NKT7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 AC007950.2-201ENST00000615045 2347 ntBASIC17.41■□□□□ 0.38
RGPD3A6NKT7 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RGPD3A6NKT7 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 MIR766-201ENST00000390223 111 ntBASIC17.4■□□□□ 0.38
RGPD3A6NKT7 RPL30-213ENST00000523172 274 ntTSL 5 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 RAB42P1-201ENST00000555078 316 ntBASIC17.4■□□□□ 0.38
RGPD3A6NKT7 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 LINC01002-223ENST00000633179 407 ntTSL 5 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 KRT8P24-201ENST00000560290 1559 ntBASIC17.4■□□□□ 0.38
RGPD3A6NKT7 AC106872.9-201ENST00000512437 1393 ntBASIC17.4■□□□□ 0.38
RGPD3A6NKT7 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 TULP3P1-202ENST00000453253 1291 ntBASIC17.4■□□□□ 0.38
RGPD3A6NKT7 RN7SL452P-201ENST00000482923 291 ntBASIC17.4■□□□□ 0.38
RGPD3A6NKT7 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 BMS1P8-203ENST00000567036 614 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms