Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AL139094.1-201ENST00000405549 1188 ntBASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AC055876.3-201ENST00000431496 288 ntBASIC15.78■□□□□ 0.12
CCDC66A2RUB6 RRP7BP-205ENST00000566851 833 ntBASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AC138649.4-201ENST00000612222 287 ntBASIC15.78■□□□□ 0.12
CCDC66A2RUB6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AL022323.5-201ENST00000624101 2059 ntBASIC15.78■□□□□ 0.12
CCDC66A2RUB6 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 MEP1AP4-201ENST00000423244 1087 ntBASIC15.77■□□□□ 0.12
CCDC66A2RUB6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 TPRX2P-201ENST00000535362 881 ntBASIC15.77■□□□□ 0.12
CCDC66A2RUB6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 AC104794.3-201ENST00000566840 1248 ntBASIC15.77■□□□□ 0.12
CCDC66A2RUB6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 BRI3BPP1-201ENST00000594224 787 ntBASIC15.77■□□□□ 0.12
CCDC66A2RUB6 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC66A2RUB6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 AC023794.5-201ENST00000564380 2157 ntBASIC15.77■□□□□ 0.11
CCDC66A2RUB6 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 USP47-202ENST00000339865 7775 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 LPO-204ENST00000543544 2350 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 KRT8P22-201ENST00000562317 1415 ntBASIC15.77■□□□□ 0.11
CCDC66A2RUB6 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC66A2RUB6 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 AC016397.2-201ENST00000624848 1985 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 CICP1-201ENST00000416803 2410 ntBASIC15.76■□□□□ 0.11
CCDC66A2RUB6 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC66A2RUB6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms