Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 KRT8P18-201ENST00000413425 1445 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 SIRPB3P-201ENST00000340424 1216 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 STK24P1-201ENST00000455035 1291 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 AC025186.1-201ENST00000478174 870 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 ALG1L15P-201ENST00000482834 794 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 ACY3-202ENST00000529256 933 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 RN7SL605P-201ENST00000577229 281 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 CSTP2-201ENST00000610599 398 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 AL591424.3-201ENST00000614278 872 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.13■□□□□ 0.17
TRIM17Q9Y577 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM17Q9Y577 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 RN7SL351P-201ENST00000469306 248 ntBASIC16.12■□□□□ 0.17
TRIM17Q9Y577 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 AL136982.5-201ENST00000605222 294 ntBASIC16.12■□□□□ 0.17
TRIM17Q9Y577 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 AC087481.3-201ENST00000602886 1894 ntBASIC16.12■□□□□ 0.17
TRIM17Q9Y577 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRIM17Q9Y577 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.11■□□□□ 0.17
TRIM17Q9Y577 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM17Q9Y577 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms