Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 TMCO5B-205ENST00000530020 894 ntBASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 DUX4L46-201ENST00000566845 751 ntBASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 AP003400.6-201ENST00000624698 740 ntBASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 AC090502.4-201ENST00000551714 1386 ntBASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 AC009093.10-201ENST00000641956 1442 ntBASIC17.13■□□□□ 0.33
HPS5Q9UPZ3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 SERBP1P2-201ENST00000436888 1164 ntBASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 AL645933.1-201ENST00000440087 609 ntBASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 AC008805.1-201ENST00000590892 364 ntBASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 HSPA8P5-201ENST00000456928 2069 ntBASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HPS5Q9UPZ3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 AC244394.1-201ENST00000435000 1665 ntBASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 AL627422.1-201ENST00000434104 580 ntBASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 BRI3P1-201ENST00000440440 378 ntBASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 AC027237.1-201ENST00000560942 655 ntBASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 AC233280.19-201ENST00000633223 136 ntBASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.11■□□□□ 0.33
HPS5Q9UPZ3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms