Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 CR383656.2-201ENST00000548656 2254 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AC010141.1-201ENST00000411585 623 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 FAM58BP-201ENST00000439056 645 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AC006033.1-201ENST00000440505 426 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 PUDPP3-201ENST00000445368 636 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AL035414.1-201ENST00000451327 857 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AP001258.2-201ENST00000529891 490 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 AL023803.2-201ENST00000620080 638 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 BEND3P1-201ENST00000421591 1944 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 MRPL37P1-201ENST00000592451 1337 ntBASIC12.3□□□□□ -0.44
CLN8Q9UBY8 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CLN8Q9UBY8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.29□□□□□ -0.44
CLN8Q9UBY8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 AC004898.1-201ENST00000451057 766 ntBASIC12.29□□□□□ -0.44
CLN8Q9UBY8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 DUX4L46-201ENST00000566845 751 ntBASIC12.29□□□□□ -0.44
CLN8Q9UBY8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 KRT8P29-201ENST00000420409 1371 ntBASIC12.29□□□□□ -0.44
CLN8Q9UBY8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.29□□□□□ -0.44
CLN8Q9UBY8 AC020907.1-201ENST00000616460 1350 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms