Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HDAC6Q9UBN7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 AC008267.1-201ENST00000474858 1069 ntBASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 AC103691.2-201ENST00000618824 433 ntBASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 AC107918.4-201ENST00000641966 3141 ntBASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HDAC6Q9UBN7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AL365209.1-201ENST00000624418 6473 ntBASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AC152010.1-201ENST00000415779 2006 ntBASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 OR2K2-202ENST00000374428 1038 ntBASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AC026316.1-201ENST00000398900 414 ntBASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms