Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 AL807761.2-201ENST00000422849 729 ntBASIC13.66□□□□□ -0.22
FAM60AQ9NP50 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 AC019193.1-201ENST00000506678 823 ntBASIC13.66□□□□□ -0.22
FAM60AQ9NP50 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 AC007326.1-201ENST00000604539 458 ntBASIC13.66□□□□□ -0.22
FAM60AQ9NP50 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 AC007191.1-201ENST00000623179 2995 ntBASIC13.66□□□□□ -0.22
FAM60AQ9NP50 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.66□□□□□ -0.22
FAM60AQ9NP50 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 AC073869.2-201ENST00000417338 1026 ntBASIC13.65□□□□□ -0.22
FAM60AQ9NP50 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 MAGEA5-201ENST00000446757 942 ntBASIC13.65□□□□□ -0.22
FAM60AQ9NP50 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FAM60AQ9NP50 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms