Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SP110Q9HB58 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
SP110Q9HB58 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SP110Q9HB58 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SP110Q9HB58 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SP110Q9HB58 DMBT1P1-203ENST00000636837 4628 ntBASIC14.83□□□□□ -0.04
SP110Q9HB58 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SP110Q9HB58 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.82□□□□□ -0.04
SP110Q9HB58 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SP110Q9HB58 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 VDAC1P1-201ENST00000439229 848 ntBASIC14.82□□□□□ -0.04
SP110Q9HB58 ST13P19-201ENST00000442505 1124 ntBASIC14.82□□□□□ -0.04
SP110Q9HB58 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.82□□□□□ -0.04
SP110Q9HB58 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.82□□□□□ -0.04
SP110Q9HB58 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.82□□□□□ -0.04
SP110Q9HB58 AC124068.2-201ENST00000569473 1109 ntBASIC14.82□□□□□ -0.04
SP110Q9HB58 MIR4538-201ENST00000581377 78 ntBASIC14.82□□□□□ -0.04
SP110Q9HB58 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SP110Q9HB58 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.82□□□□□ -0.04
SP110Q9HB58 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SP110Q9HB58 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
SP110Q9HB58 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SP110Q9HB58 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.81□□□□□ -0.04
SP110Q9HB58 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.81□□□□□ -0.04
SP110Q9HB58 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SP110Q9HB58 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SP110Q9HB58 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.81□□□□□ -0.04
SP110Q9HB58 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SP110Q9HB58 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.81□□□□□ -0.04
SP110Q9HB58 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.81□□□□□ -0.04
SP110Q9HB58 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.81□□□□□ -0.04
SP110Q9HB58 AC004898.1-201ENST00000451057 766 ntBASIC14.81□□□□□ -0.04
SP110Q9HB58 AC104073.2-201ENST00000453737 312 ntBASIC14.81□□□□□ -0.04
SP110Q9HB58 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SP110Q9HB58 HLA-J-204ENST00000495278 958 ntBASIC14.81□□□□□ -0.04
SP110Q9HB58 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SP110Q9HB58 AC013355.1-201ENST00000562625 723 ntBASIC14.81□□□□□ -0.04
SP110Q9HB58 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.81□□□□□ -0.04
SP110Q9HB58 AC104506.1-201ENST00000609247 429 ntBASIC14.81□□□□□ -0.04
SP110Q9HB58 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.81□□□□□ -0.04
SP110Q9HB58 AC068587.8-201ENST00000641239 219 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms