Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
UPF2Q9HAU5 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.83■□□□□ 0.45
UPF2Q9HAU5 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 AC064801.2-201ENST00000625052 1303 ntBASIC17.83■□□□□ 0.44
UPF2Q9HAU5 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 KRT18P25-201ENST00000508931 1278 ntBASIC17.83■□□□□ 0.44
UPF2Q9HAU5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
UPF2Q9HAU5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 RN7SKP230-201ENST00000365642 335 ntBASIC17.82■□□□□ 0.44
UPF2Q9HAU5 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 KRT18P8-201ENST00000581937 1246 ntBASIC17.82■□□□□ 0.44
UPF2Q9HAU5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
UPF2Q9HAU5 AC019294.4-201ENST00000561777 2905 ntBASIC17.82■□□□□ 0.44
UPF2Q9HAU5 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 USP17L6P-201ENST00000382470 1197 ntBASIC17.81■□□□□ 0.44
UPF2Q9HAU5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 AL442647.2-201ENST00000429864 857 ntBASIC17.81■□□□□ 0.44
UPF2Q9HAU5 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 DNAJB3-202ENST00000449667 1266 ntBASIC17.81■□□□□ 0.44
UPF2Q9HAU5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 AC138696.2-201ENST00000607376 223 ntBASIC17.81■□□□□ 0.44
UPF2Q9HAU5 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC17.81■□□□□ 0.44
UPF2Q9HAU5 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms