Protein–RNA interactions for Protein: Q9C035

TRIM5, Tripartite motif-containing protein 5, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM5Q9C035 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
TRIM5Q9C035 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM5Q9C035 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM5Q9C035 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM5Q9C035 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM5Q9C035 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM5Q9C035 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM5Q9C035 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM5Q9C035 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM5Q9C035 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM5Q9C035 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM5Q9C035 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM5Q9C035 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.19■□□□□ 0.18
TRIM5Q9C035 AC064801.2-201ENST00000625052 1303 ntBASIC16.19■□□□□ 0.18
TRIM5Q9C035 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 RN7SKP230-201ENST00000365642 335 ntBASIC16.18■□□□□ 0.18
TRIM5Q9C035 KRT18P13-201ENST00000400056 1290 ntBASIC16.18■□□□□ 0.18
TRIM5Q9C035 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 AC112482.1-201ENST00000492080 688 ntBASIC16.18■□□□□ 0.18
TRIM5Q9C035 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 AC109322.1-201ENST00000524499 1264 ntBASIC16.18■□□□□ 0.18
TRIM5Q9C035 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 BAP1-211ENST00000615113 489 ntBASIC16.18■□□□□ 0.18
TRIM5Q9C035 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 MARK2P9-201ENST00000430958 1727 ntBASIC16.18■□□□□ 0.18
TRIM5Q9C035 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 AC100757.3-201ENST00000622361 1406 ntBASIC16.18■□□□□ 0.18
TRIM5Q9C035 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM5Q9C035 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM5Q9C035 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 AL391647.1-201ENST00000395664 511 ntBASIC16.17■□□□□ 0.18
TRIM5Q9C035 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 AC092580.3-201ENST00000430932 139 ntBASIC16.17■□□□□ 0.18
TRIM5Q9C035 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 AC010327.4-202ENST00000591484 748 ntBASIC16.17■□□□□ 0.18
TRIM5Q9C035 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 AL590560.3-201ENST00000623350 461 ntBASIC16.17■□□□□ 0.18
TRIM5Q9C035 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM5Q9C035 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM5Q9C035 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms