Protein–RNA interactions for Protein: Q9BUF7

CRB3, Protein crumbs homolog 3, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRB3Q9BUF7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 CICP20-201ENST00000443330 2801 ntBASIC13.62□□□□□ -0.23
CRB3Q9BUF7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CRB3Q9BUF7 AC007191.1-201ENST00000623179 2995 ntBASIC13.62□□□□□ -0.23
CRB3Q9BUF7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 MIR3907-201ENST00000579424 151 ntBASIC13.61□□□□□ -0.23
CRB3Q9BUF7 MIR3188-201ENST00000583494 85 ntBASIC13.61□□□□□ -0.23
CRB3Q9BUF7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 AC012044.1-201ENST00000603431 297 ntBASIC13.61□□□□□ -0.23
CRB3Q9BUF7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 AC079336.7-201ENST00000623428 1078 ntBASIC13.61□□□□□ -0.23
CRB3Q9BUF7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 AC005089.1-201ENST00000619486 2241 ntBASIC13.61□□□□□ -0.23
CRB3Q9BUF7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CRB3Q9BUF7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 MYADML-201ENST00000474610 2147 ntBASIC13.6□□□□□ -0.23
CRB3Q9BUF7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.6□□□□□ -0.23
CRB3Q9BUF7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms