Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 AC022364.1-202ENST00000617468 2409 ntBASIC13.66□□□□□ -0.22
NR1H4Q96RI1 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 AC104758.3-203ENST00000562938 2123 ntBASIC13.66□□□□□ -0.22
NR1H4Q96RI1 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
NR1H4Q96RI1 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 AC026992.2-203ENST00000563004 2419 ntBASIC13.65□□□□□ -0.22
NR1H4Q96RI1 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 AC073862.5-201ENST00000624129 2027 ntBASIC13.65□□□□□ -0.22
NR1H4Q96RI1 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 MIR940-201ENST00000401276 94 ntBASIC13.65□□□□□ -0.22
NR1H4Q96RI1 MED15P5-201ENST00000423150 992 ntBASIC13.65□□□□□ -0.22
NR1H4Q96RI1 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 KRT18P3-201ENST00000451602 1288 ntBASIC13.65□□□□□ -0.22
NR1H4Q96RI1 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 AL121894.2-201ENST00000602977 491 ntBASIC13.65□□□□□ -0.22
NR1H4Q96RI1 BAP1-211ENST00000615113 489 ntBASIC13.65□□□□□ -0.22
NR1H4Q96RI1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.65□□□□□ -0.22
NR1H4Q96RI1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SHC1P1-201ENST00000425230 1745 ntBASIC13.64□□□□□ -0.23
NR1H4Q96RI1 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.64□□□□□ -0.23
NR1H4Q96RI1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms