Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 TCAM1P-207ENST00000485295 1537 ntBASIC13.28□□□□□ -0.28
SNX18Q96RF0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SNX18Q96RF0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.28□□□□□ -0.28
SNX18Q96RF0 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.27□□□□□ -0.28
SNX18Q96RF0 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SNX18Q96RF0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SNX18Q96RF0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 AC138696.2-201ENST00000607376 223 ntBASIC13.27□□□□□ -0.29
SNX18Q96RF0 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 AL162274.1-201ENST00000617191 1098 ntBASIC13.27□□□□□ -0.29
SNX18Q96RF0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SNX18Q96RF0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.27□□□□□ -0.29
SNX18Q96RF0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 RN7SKP230-201ENST00000365642 335 ntBASIC13.26□□□□□ -0.29
SNX18Q96RF0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AC112492.5-201ENST00000421897 457 ntBASIC13.26□□□□□ -0.29
SNX18Q96RF0 TMEM14DP-201ENST00000422205 345 ntBASIC13.26□□□□□ -0.29
SNX18Q96RF0 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AC245100.3-201ENST00000441281 285 ntBASIC13.26□□□□□ -0.29
SNX18Q96RF0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SNX18Q96RF0 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SNX18Q96RF0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms