Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
DDX1Q92499 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
DDX1Q92499 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.34■□□□□ 0.05
DDX1Q92499 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
DDX1Q92499 OR2R1P-201ENST00000441404 914 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
DDX1Q92499 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
DDX1Q92499 SCARNA21-201ENST00000517026 139 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 AC021016.3-201ENST00000608367 477 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 AP000346.4-201ENST00000614827 381 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 AC133540.1-201ENST00000620845 1019 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
DDX1Q92499 AC022748.3-201ENST00000621828 275 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
DDX1Q92499 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 FAM90A7P-201ENST00000382628 1395 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 FAM90A23P-201ENST00000400136 1395 ntBASIC15.34■□□□□ 0.05
DDX1Q92499 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
DDX1Q92499 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
DDX1Q92499 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
DDX1Q92499 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.34■□□□□ 0.05
DDX1Q92499 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.34■□□□□ 0.05
DDX1Q92499 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.33■□□□□ 0.05
DDX1Q92499 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
DDX1Q92499 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DDX1Q92499 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
DDX1Q92499 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
DDX1Q92499 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
DDX1Q92499 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DDX1Q92499 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
DDX1Q92499 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
DDX1Q92499 AC104581.4-201ENST00000623126 3052 ntBASIC15.33■□□□□ 0.05
DDX1Q92499 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
DDX1Q92499 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.33■□□□□ 0.04
DDX1Q92499 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.33■□□□□ 0.04
DDX1Q92499 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 CCT8L1P-201ENST00000465400 1674 ntBASIC15.33■□□□□ 0.04
DDX1Q92499 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.33■□□□□ 0.04
DDX1Q92499 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.33■□□□□ 0.04
DDX1Q92499 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
DDX1Q92499 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.33■□□□□ 0.04
DDX1Q92499 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.33■□□□□ 0.04
DDX1Q92499 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.33■□□□□ 0.04
DDX1Q92499 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.33■□□□□ 0.04
DDX1Q92499 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.33■□□□□ 0.04
DDX1Q92499 RPL18P13-201ENST00000478088 569 ntBASIC15.33■□□□□ 0.04
DDX1Q92499 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.33■□□□□ 0.04
DDX1Q92499 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC15.33■□□□□ 0.04
DDX1Q92499 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.33■□□□□ 0.04
DDX1Q92499 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.33■□□□□ 0.04
DDX1Q92499 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.33■□□□□ 0.04
DDX1Q92499 PGAM1P5-201ENST00000548011 764 ntBASIC15.33■□□□□ 0.04
DDX1Q92499 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.33■□□□□ 0.04
DDX1Q92499 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.33■□□□□ 0.04
DDX1Q92499 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.33■□□□□ 0.04
DDX1Q92499 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.33■□□□□ 0.04
DDX1Q92499 AC138649.2-201ENST00000615886 705 ntBASIC15.33■□□□□ 0.04
DDX1Q92499 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.33■□□□□ 0.04
DDX1Q92499 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.33■□□□□ 0.04
DDX1Q92499 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.33■□□□□ 0.04
DDX1Q92499 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
DDX1Q92499 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms