Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 MRPL37P1-201ENST00000592451 1337 ntBASIC9.79□□□□□ -0.84
COPS9Q8WXC6 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 GZF1-201ENST00000338121 4835 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
COPS9Q8WXC6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 TRAF3IP2-207ENST00000368761 5128 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 PTGIS-201ENST00000244043 5579 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 BOC-215ENST00000495514 4646 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 URB2-201ENST00000258243 5613 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 NUS1P3-201ENST00000423502 862 ntBASIC9.78□□□□□ -0.84
COPS9Q8WXC6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 AL135744.1-201ENST00000565098 629 ntBASIC9.78□□□□□ -0.84
COPS9Q8WXC6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 AC004877.2-201ENST00000623941 599 ntBASIC9.78□□□□□ -0.84
COPS9Q8WXC6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 AL118506.1-201ENST00000601296 3082 ntBASIC9.78□□□□□ -0.84
COPS9Q8WXC6 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 PLEC-203ENST00000354589 14736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 LINC01165-201ENST00000445190 1623 ntBASIC9.78□□□□□ -0.84
COPS9Q8WXC6 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC9.78□□□□□ -0.84
COPS9Q8WXC6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC9.77□□□□□ -0.84
COPS9Q8WXC6 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
COPS9Q8WXC6 F2-205ENST00000530231 1849 ntTSL 5 BASIC9.77□□□□□ -0.84
COPS9Q8WXC6 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
COPS9Q8WXC6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.77□□□□□ -0.84
COPS9Q8WXC6 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC9.77□□□□□ -0.84
COPS9Q8WXC6 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
COPS9Q8WXC6 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
COPS9Q8WXC6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC9.77□□□□□ -0.85
COPS9Q8WXC6 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
COPS9Q8WXC6 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
COPS9Q8WXC6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms