Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1BQ8WW43 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.08□□□□□ -0.32
APH1BQ8WW43 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APH1BQ8WW43 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1BQ8WW43 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
APH1BQ8WW43 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
APH1BQ8WW43 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APH1BQ8WW43 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1BQ8WW43 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APH1BQ8WW43 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
APH1BQ8WW43 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.08□□□□□ -0.32
APH1BQ8WW43 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1BQ8WW43 AC009093.2-202ENST00000620513 2079 ntBASIC13.08□□□□□ -0.32
APH1BQ8WW43 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APH1BQ8WW43 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 RPSAP43-201ENST00000402237 625 ntBASIC13.07□□□□□ -0.32
APH1BQ8WW43 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 AC104794.3-201ENST00000566840 1248 ntBASIC13.07□□□□□ -0.32
APH1BQ8WW43 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 AL121894.2-201ENST00000602977 491 ntBASIC13.07□□□□□ -0.32
APH1BQ8WW43 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 MSNP1-201ENST00000511640 1732 ntBASIC13.07□□□□□ -0.32
APH1BQ8WW43 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APH1BQ8WW43 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.07□□□□□ -0.32
APH1BQ8WW43 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APH1BQ8WW43 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 PI4KAP2-201ENST00000360806 2080 ntBASIC13.06□□□□□ -0.32
APH1BQ8WW43 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
APH1BQ8WW43 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APH1BQ8WW43 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.06□□□□□ -0.32
APH1BQ8WW43 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms