Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.3■□□□□ 0.04
UBA3Q8TBC4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.3■□□□□ 0.04
UBA3Q8TBC4 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.3■□□□□ 0.04
UBA3Q8TBC4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA3Q8TBC4 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UBA3Q8TBC4 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UBA3Q8TBC4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBA3Q8TBC4 LINC02486-201ENST00000604157 3000 ntBASIC15.3■□□□□ 0.04
UBA3Q8TBC4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBA3Q8TBC4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 LAP3P2-201ENST00000454686 1454 ntBASIC15.29■□□□□ 0.04
UBA3Q8TBC4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 GPAA1P2-201ENST00000417923 928 ntBASIC15.29■□□□□ 0.04
UBA3Q8TBC4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 XBP1P1-201ENST00000436573 652 ntBASIC15.29■□□□□ 0.04
UBA3Q8TBC4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 MIR4525-201ENST00000580000 75 ntBASIC15.29■□□□□ 0.04
UBA3Q8TBC4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 AL132994.2-201ENST00000603120 687 ntBASIC15.29■□□□□ 0.04
UBA3Q8TBC4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBA3Q8TBC4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 AC016700.1-201ENST00000429424 312 ntBASIC15.28■□□□□ 0.04
UBA3Q8TBC4 FNTAP2-201ENST00000430308 634 ntBASIC15.28■□□□□ 0.04
UBA3Q8TBC4 AC078875.1-201ENST00000431907 724 ntBASIC15.28■□□□□ 0.04
UBA3Q8TBC4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 MARK2P5-201ENST00000507649 634 ntBASIC15.28■□□□□ 0.04
UBA3Q8TBC4 AC022217.1-201ENST00000521069 738 ntBASIC15.28■□□□□ 0.04
UBA3Q8TBC4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 MIR3615-201ENST00000581999 87 ntBASIC15.28■□□□□ 0.04
UBA3Q8TBC4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UBA3Q8TBC4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms