Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 KRT18P9-201ENST00000604826 1300 ntBASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SHKBP1Q8TBC3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 MTHFR-210ENST00000641407 2387 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 AL512430.1-201ENST00000392575 860 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 RPSAP31-201ENST00000416648 895 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 RPS9P1-201ENST00000419943 583 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 AL592076.1-201ENST00000424448 303 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 NDUFS6P1-201ENST00000485187 316 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 AC124068.2-201ENST00000569473 1109 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 MIR6842-201ENST00000612539 65 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 RN7SL736P-201ENST00000613111 269 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 INTS4P1-203ENST00000641008 3683 ntBASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SHKBP1Q8TBC3 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 AC015688.4-201ENST00000580780 1647 ntBASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 ST13P19-201ENST00000442505 1124 ntBASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 DUTP3-201ENST00000450025 415 ntBASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 SIGLEC18P-201ENST00000602271 909 ntBASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 AC005632.3-201ENST00000605544 308 ntBASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 AL022334.2-201ENST00000610000 484 ntBASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.15■□□□□ 0.02
SHKBP1Q8TBC3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms