Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 MIR600HG-201ENST00000449175 5984 ntBASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCDH19Q8TAB3 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AL365209.1-201ENST00000624418 6473 ntBASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 KRT18P36-201ENST00000411618 1276 ntBASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AC005324.6-201ENST00000587972 613 ntBASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AL118558.3-201ENST00000607414 1079 ntBASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 BAP1-211ENST00000615113 489 ntBASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AC133540.1-201ENST00000620845 1019 ntBASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH19Q8TAB3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 MIR1247-201ENST00000408206 136 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 MIR663B-201ENST00000408361 115 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 BTBD6P1-201ENST00000412176 1267 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 VDAC1P1-201ENST00000439229 848 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 RNMTL1P1-201ENST00000454103 560 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 RPL18P13-201ENST00000478088 569 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 SCARNA21-201ENST00000517026 139 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AC022217.1-201ENST00000521069 738 ntBASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCDH19Q8TAB3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms