Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ACKR1-201ENST00000368121 1240 ntBASIC11.76□□□□□ -0.53
BSXQ3C1V8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 METTL21AP1-201ENST00000438852 635 ntBASIC11.76□□□□□ -0.53
BSXQ3C1V8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.76□□□□□ -0.53
BSXQ3C1V8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 AC092552.1-201ENST00000547243 906 ntBASIC11.76□□□□□ -0.53
BSXQ3C1V8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 AP001002.3-201ENST00000623482 206 ntBASIC11.76□□□□□ -0.53
BSXQ3C1V8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 CSPG4P11-201ENST00000560634 4910 ntBASIC11.76□□□□□ -0.53
BSXQ3C1V8 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BSXQ3C1V8 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 RN7SKP230-201ENST00000365642 335 ntBASIC11.75□□□□□ -0.53
BSXQ3C1V8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.75□□□□□ -0.53
BSXQ3C1V8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AL512638.1-201ENST00000457493 794 ntBASIC11.75□□□□□ -0.53
BSXQ3C1V8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AC103988.2-201ENST00000561804 725 ntBASIC11.75□□□□□ -0.53
BSXQ3C1V8 AL359711.2-201ENST00000563105 872 ntBASIC11.75□□□□□ -0.53
BSXQ3C1V8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AC005252.2-201ENST00000624630 1141 ntBASIC11.75□□□□□ -0.53
BSXQ3C1V8 AC008761.3-201ENST00000624803 892 ntBASIC11.75□□□□□ -0.53
BSXQ3C1V8 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
BSXQ3C1V8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
BSXQ3C1V8 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms