Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SHROOM1Q2M3G4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 SCARNA12-201ENST00000459155 270 ntBASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 RN7SL818P-201ENST00000485099 259 ntBASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 AC093909.3-201ENST00000504783 336 ntBASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 RN7SL455P-201ENST00000580629 282 ntBASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 RN7SL725P-201ENST00000606439 259 ntBASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 CICP16-201ENST00000502609 2813 ntBASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 AC025183.3-201ENST00000623526 1482 ntBASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHROOM1Q2M3G4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 LINC00552-201ENST00000625151 2579 ntBASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 TPT1P11-201ENST00000458482 498 ntBASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 AP000322.3-201ENST00000608665 388 ntBASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 MIR6074-201ENST00000612054 107 ntBASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 TEKT4P2-202ENST00000559466 1312 ntBASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 AC090505.1-201ENST00000430515 1834 ntBASIC16.66■□□□□ 0.26
SHROOM1Q2M3G4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHROOM1Q2M3G4 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms