Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 ANKRD19P-201ENST00000338192 862 ntBASIC11.73□□□□□ -0.53
CX3CL1P78423 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
CX3CL1P78423 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.73□□□□□ -0.53
CX3CL1P78423 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 AL355994.2-201ENST00000447882 704 ntBASIC11.73□□□□□ -0.53
CX3CL1P78423 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.73□□□□□ -0.53
CX3CL1P78423 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC11.73□□□□□ -0.53
CX3CL1P78423 SNX29P1-201ENST00000548357 1007 ntBASIC11.73□□□□□ -0.53
CX3CL1P78423 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.73□□□□□ -0.53
CX3CL1P78423 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 C2orf69P2-201ENST00000562032 1123 ntBASIC11.73□□□□□ -0.53
CX3CL1P78423 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 PPY2P-201ENST00000582808 702 ntBASIC11.73□□□□□ -0.53
CX3CL1P78423 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CX3CL1P78423 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CX3CL1P78423 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.73□□□□□ -0.53
CX3CL1P78423 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.73□□□□□ -0.53
CX3CL1P78423 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
CX3CL1P78423 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CX3CL1P78423 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CX3CL1P78423 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 CR383656.2-201ENST00000548656 2254 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 MYADML-201ENST00000474610 2147 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC11.72□□□□□ -0.53
CX3CL1P78423 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CX3CL1P78423 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC11.72□□□□□ -0.53
CX3CL1P78423 CNN2P10-201ENST00000443067 918 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 AC022210.1-201ENST00000449856 793 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 HOMER2P2-201ENST00000451621 847 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 AC103988.2-201ENST00000561804 725 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 AP005482.1-201ENST00000563722 1273 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC11.72□□□□□ -0.53
CX3CL1P78423 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.72□□□□□ -0.53
CX3CL1P78423 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC11.72□□□□□ -0.53
CX3CL1P78423 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CX3CL1P78423 AC239800.4-201ENST00000603712 296 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 AC017083.2-201ENST00000608069 979 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 AC133552.6-201ENST00000613406 534 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 AP001002.3-201ENST00000623482 206 ntBASIC11.72□□□□□ -0.53
CX3CL1P78423 MVK-217ENST00000639206 367 ntTSL 5 BASIC11.72□□□□□ -0.53
CX3CL1P78423 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms