Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.94□□□□□ -0.34
ACTA1P68133 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 POM121L8P-201ENST00000417732 1281 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.94□□□□□ -0.34
ACTA1P68133 DFFBP1-201ENST00000433250 979 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 AL162726.2-201ENST00000438986 1017 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 POM121L9P-203ENST00000441984 1285 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 AC123567.1-201ENST00000548294 1261 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.94□□□□□ -0.34
ACTA1P68133 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 AC009486.1-201ENST00000569860 813 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.94□□□□□ -0.34
ACTA1P68133 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.94□□□□□ -0.34
ACTA1P68133 TMEM261P1-201ENST00000604899 340 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.94□□□□□ -0.34
ACTA1P68133 ENPP7P14-201ENST00000621765 1040 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.94□□□□□ -0.34
ACTA1P68133 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 AP000593.2-201ENST00000542775 1433 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ACTA1P68133 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
ACTA1P68133 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ACTA1P68133 AC135782.3-201ENST00000562782 2105 ntBASIC12.94□□□□□ -0.34
ACTA1P68133 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.94□□□□□ -0.34
ACTA1P68133 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
ACTA1P68133 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 NSL1-201ENST00000366976 722 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 MRPS18AP1-201ENST00000414458 589 ntBASIC12.93□□□□□ -0.34
ACTA1P68133 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.93□□□□□ -0.34
ACTA1P68133 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.93□□□□□ -0.34
ACTA1P68133 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 RN7SL48P-201ENST00000579283 293 ntBASIC12.93□□□□□ -0.34
ACTA1P68133 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
ACTA1P68133 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.93□□□□□ -0.34
ACTA1P68133 AL391825.1-201ENST00000457671 1364 ntBASIC12.93□□□□□ -0.34
ACTA1P68133 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ACTA1P68133 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.93□□□□□ -0.34
ACTA1P68133 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.92□□□□□ -0.34
ACTA1P68133 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ACTA1P68133 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ACTA1P68133 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ACTA1P68133 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ACTA1P68133 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ACTA1P68133 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ACTA1P68133 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
ACTA1P68133 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.92□□□□□ -0.34
ACTA1P68133 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ACTA1P68133 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ACTA1P68133 AC004241.5-201ENST00000623870 2448 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms