Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AC254562.1-201ENST00000417586 456 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AC112482.1-201ENST00000492080 688 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 MESTP3-201ENST00000503460 968 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AC135586.1-201ENST00000539323 574 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AC124283.3-201ENST00000570869 594 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 PRR29-204ENST00000577953 565 ntTSL 4 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AL158211.3-201ENST00000607385 239 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AP005019.2-201ENST00000615104 511 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 MSNP1-201ENST00000511640 1732 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.93□□□□□ -0.5
SUPT4H1P63272 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SUPT4H1P63272 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.93□□□□□ -0.5
SUPT4H1P63272 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 AC108024.1-201ENST00000626286 1721 ntBASIC11.92□□□□□ -0.5
SUPT4H1P63272 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 AC107890.1-201ENST00000422478 521 ntBASIC11.92□□□□□ -0.5
SUPT4H1P63272 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 AC008738.7-201ENST00000609744 511 ntBASIC11.92□□□□□ -0.5
SUPT4H1P63272 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SUPT4H1P63272 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
SUPT4H1P63272 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SUPT4H1P63272 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms