Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 AC007274.2-201ENST00000421675 662 ntBASIC16.61■□□□□ 0.25
CHMP4BP1P59074 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 AC005962.1-201ENST00000584100 773 ntBASIC16.61■□□□□ 0.25
CHMP4BP1P59074 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.61■□□□□ 0.25
CHMP4BP1P59074 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 AC128714.1-201ENST00000637035 887 ntBASIC16.61■□□□□ 0.25
CHMP4BP1P59074 NAP1L6-202ENST00000641404 1222 ntBASIC16.61■□□□□ 0.25
CHMP4BP1P59074 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 LILRP1-201ENST00000444199 1370 ntBASIC16.61■□□□□ 0.25
CHMP4BP1P59074 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CHMP4BP1P59074 MBLAC2-202ENST00000514906 1936 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 REXO1L2P-201ENST00000425429 2069 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 PTENP1-202ENST00000532280 3996 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AC244394.1-201ENST00000435000 1665 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 RN7SKP230-201ENST00000365642 335 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AL596276.2-201ENST00000447525 331 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AL160314.3-201ENST00000556041 767 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 MIR5572-201ENST00000583188 137 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AC012044.1-201ENST00000603431 297 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AC107918.4-201ENST00000641966 3141 ntBASIC16.6■□□□□ 0.25
CHMP4BP1P59074 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP4BP1P59074 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 SALL4P5-201ENST00000419001 1760 ntBASIC16.59■□□□□ 0.25
CHMP4BP1P59074 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP4BP1P59074 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms