Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN20P56880 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
CLDN20P56880 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 AC083964.2-201ENST00000623988 2396 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CLDN20P56880 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN20P56880 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN20P56880 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CLDN20P56880 E2F3P2-201ENST00000447755 1422 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 MIR663B-201ENST00000408361 115 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN20P56880 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CLDN20P56880 AC104306.2-201ENST00000451877 341 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN20P56880 ALG3P1-201ENST00000508806 1114 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.32□□□□□ -0.28
CLDN20P56880 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN20P56880 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.32□□□□□ -0.28
CLDN20P56880 AC005730.2-201ENST00000564549 1184 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN20P56880 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN20P56880 AL118558.3-201ENST00000607414 1079 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLDN20P56880 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN20P56880 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN20P56880 AC118758.2-201ENST00000614242 2813 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 MRPL37P1-201ENST00000592451 1337 ntBASIC13.32□□□□□ -0.28
CLDN20P56880 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN20P56880 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CLDN20P56880 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN20P56880 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CLDN20P56880 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
CLDN20P56880 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 AC018735.1-201ENST00000437208 1502 ntBASIC13.31□□□□□ -0.28
CLDN20P56880 AC010141.1-201ENST00000411585 623 ntBASIC13.31□□□□□ -0.28
CLDN20P56880 AL354877.1-201ENST00000424412 413 ntBASIC13.31□□□□□ -0.28
CLDN20P56880 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.31□□□□□ -0.28
CLDN20P56880 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.31□□□□□ -0.28
CLDN20P56880 PUDPP3-201ENST00000445368 636 ntBASIC13.31□□□□□ -0.28
CLDN20P56880 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.31□□□□□ -0.28
CLDN20P56880 TMEM198B-204ENST00000484016 896 ntBASIC13.31□□□□□ -0.28
CLDN20P56880 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 FAM8A2P-201ENST00000528813 1142 ntBASIC13.31□□□□□ -0.28
CLDN20P56880 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN20P56880 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN20P56880 MIR4783-201ENST00000580343 82 ntBASIC13.31□□□□□ -0.28
CLDN20P56880 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN20P56880 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.31□□□□□ -0.28
CLDN20P56880 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CLDN20P56880 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms