Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
GTF2A1P52655 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.21□□□□□ -0.14
GTF2A1P52655 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC14.21□□□□□ -0.14
GTF2A1P52655 PRKN-206ENST00000366898 4180 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GTF2A1P52655 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
GTF2A1P52655 DERL3-203ENST00000404056 3113 ntTSL 5 BASIC14.21□□□□□ -0.14
GTF2A1P52655 AC022364.1-202ENST00000617468 2409 ntBASIC14.21□□□□□ -0.14
GTF2A1P52655 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
GTF2A1P52655 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GTF2A1P52655 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GTF2A1P52655 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
GTF2A1P52655 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC14.21□□□□□ -0.14
GTF2A1P52655 RPS6KA1-220ENST00000531382 2359 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
GTF2A1P52655 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
GTF2A1P52655 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
GTF2A1P52655 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.2□□□□□ -0.14
GTF2A1P52655 RPL5P21-201ENST00000404620 815 ntBASIC14.2□□□□□ -0.14
GTF2A1P52655 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.2□□□□□ -0.14
GTF2A1P52655 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.2□□□□□ -0.14
GTF2A1P52655 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.2□□□□□ -0.14
GTF2A1P52655 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.2□□□□□ -0.14
GTF2A1P52655 AL031432.2-201ENST00000566714 459 ntBASIC14.2□□□□□ -0.14
GTF2A1P52655 AL928711.1-201ENST00000570165 459 ntBASIC14.2□□□□□ -0.14
GTF2A1P52655 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
GTF2A1P52655 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 AC008735.5-201ENST00000623544 497 ntBASIC14.2□□□□□ -0.14
GTF2A1P52655 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.2□□□□□ -0.14
GTF2A1P52655 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
GTF2A1P52655 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 AL512791.2-201ENST00000615251 4609 ntBASIC14.2□□□□□ -0.14
GTF2A1P52655 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC14.2□□□□□ -0.14
GTF2A1P52655 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 GRPEL2-201ENST00000329271 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
GTF2A1P52655 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GTF2A1P52655 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.19□□□□□ -0.14
GTF2A1P52655 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
GTF2A1P52655 ZMIZ2-215ENST00000615423 2772 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 AL391294.1-201ENST00000641352 4068 ntBASIC14.19□□□□□ -0.14
GTF2A1P52655 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.19□□□□□ -0.14
GTF2A1P52655 AL445250.1-201ENST00000641671 2259 ntBASIC14.19□□□□□ -0.14
GTF2A1P52655 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.19□□□□□ -0.14
GTF2A1P52655 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.19□□□□□ -0.14
GTF2A1P52655 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GTF2A1P52655 AL513480.1-201ENST00000451731 511 ntBASIC14.19□□□□□ -0.14
GTF2A1P52655 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.19□□□□□ -0.14
GTF2A1P52655 KRT18P35-201ENST00000510488 1269 ntBASIC14.19□□□□□ -0.14
GTF2A1P52655 AC012640.2-201ENST00000561606 901 ntBASIC14.19□□□□□ -0.14
GTF2A1P52655 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms