Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC002044.2-201ENST00000624910 970 ntBASIC15.09■□□□□ 0.01
CLCN4P51793 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.09■□□□□ 0.01
CLCN4P51793 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.09■□□□□ 0.01
CLCN4P51793 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCN4P51793 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.09■□□□□ 0.01
CLCN4P51793 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCN4P51793 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.09■□□□□ 0.01
CLCN4P51793 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.08■□□□□ 0.01
CLCN4P51793 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CLCN4P51793 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLCN4P51793 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCN4P51793 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.08■□□□□ 0.01
CLCN4P51793 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLCN4P51793 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLCN4P51793 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.08■□□□□ 0.01
CLCN4P51793 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
CLCN4P51793 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCN4P51793 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
CLCN4P51793 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLCN4P51793 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCN4P51793 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCN4P51793 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.08■□□□□ 0.01
CLCN4P51793 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.08■□□□□ 0
CLCN4P51793 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.08■□□□□ 0
CLCN4P51793 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.08■□□□□ 0
CLCN4P51793 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.08■□□□□ 0
CLCN4P51793 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 PSMD4P1-201ENST00000433951 1109 ntBASIC15.08■□□□□ 0
CLCN4P51793 AL161932.2-201ENST00000435436 679 ntBASIC15.08■□□□□ 0
CLCN4P51793 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.08■□□□□ 0
CLCN4P51793 AC024293.1-201ENST00000467930 498 ntBASIC15.08■□□□□ 0
CLCN4P51793 RN7SL396P-201ENST00000471086 295 ntBASIC15.08■□□□□ 0
CLCN4P51793 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.08■□□□□ 0
CLCN4P51793 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.08■□□□□ 0
CLCN4P51793 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.08■□□□□ 0
CLCN4P51793 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.08■□□□□ 0
CLCN4P51793 AL022344.2-201ENST00000568976 968 ntBASIC15.08■□□□□ 0
CLCN4P51793 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.08■□□□□ 0
CLCN4P51793 AL451007.2-201ENST00000632004 563 ntBASIC15.08■□□□□ 0
CLCN4P51793 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC15.08■□□□□ 0
CLCN4P51793 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.08■□□□□ 0
CLCN4P51793 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCN4P51793 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.08■□□□□ 0
CLCN4P51793 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.08■□□□□ 0
CLCN4P51793 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLCN4P51793 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.07■□□□□ 0
CLCN4P51793 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CLCN4P51793 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCN4P51793 AC067931.2-201ENST00000623655 2003 ntBASIC15.07■□□□□ 0
CLCN4P51793 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CLCN4P51793 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCN4P51793 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.07■□□□□ 0
CLCN4P51793 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CLCN4P51793 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCN4P51793 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.07■□□□□ 0
CLCN4P51793 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.07■□□□□ 0
CLCN4P51793 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.07■□□□□ 0
CLCN4P51793 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.07■□□□□ 0
CLCN4P51793 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC15.07■□□□□ 0
CLCN4P51793 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms