Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CD40LGP29965 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 FO393414.2-201ENST00000405153 598 ntBASIC12.87□□□□□ -0.35
CD40LGP29965 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.87□□□□□ -0.35
CD40LGP29965 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.87□□□□□ -0.35
CD40LGP29965 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.87□□□□□ -0.35
CD40LGP29965 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40LGP29965 SLED1-202ENST00000512051 380 ntBASIC12.87□□□□□ -0.35
CD40LGP29965 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.87□□□□□ -0.35
CD40LGP29965 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40LGP29965 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.87□□□□□ -0.35
CD40LGP29965 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40LGP29965 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
CD40LGP29965 AC099522.2-201ENST00000607001 744 ntBASIC12.87□□□□□ -0.35
CD40LGP29965 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 AC055717.3-201ENST00000622967 595 ntBASIC12.87□□□□□ -0.35
CD40LGP29965 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 AC092053.3-201ENST00000641308 4975 ntBASIC12.87□□□□□ -0.35
CD40LGP29965 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.87□□□□□ -0.35
CD40LGP29965 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CD40LGP29965 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CD40LGP29965 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CD40LGP29965 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40LGP29965 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 AC124319.4-201ENST00000622931 2161 ntBASIC12.86□□□□□ -0.35
CD40LGP29965 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 MSNP1-201ENST00000511640 1732 ntBASIC12.86□□□□□ -0.35
CD40LGP29965 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40LGP29965 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.86□□□□□ -0.35
CD40LGP29965 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
CD40LGP29965 AC254562.1-201ENST00000417586 456 ntBASIC12.86□□□□□ -0.35
CD40LGP29965 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 ALG1L5P-201ENST00000482043 771 ntBASIC12.86□□□□□ -0.35
CD40LGP29965 YBX1P5-201ENST00000509441 847 ntBASIC12.86□□□□□ -0.35
CD40LGP29965 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.86□□□□□ -0.35
CD40LGP29965 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40LGP29965 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CD40LGP29965 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CD40LGP29965 AC027307.2-201ENST00000591252 911 ntBASIC12.86□□□□□ -0.35
CD40LGP29965 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.86□□□□□ -0.35
CD40LGP29965 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40LGP29965 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.86□□□□□ -0.35
CD40LGP29965 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CD40LGP29965 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.86□□□□□ -0.35
CD40LGP29965 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms