Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.36□□□□□ -0.11
VARSP26640 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.36□□□□□ -0.11
VARSP26640 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
VARSP26640 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
VARSP26640 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 Z97985.1-201ENST00000332270 946 ntBASIC14.36□□□□□ -0.11
VARSP26640 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.36□□□□□ -0.11
VARSP26640 KRT8P13-201ENST00000463294 1010 ntBASIC14.36□□□□□ -0.11
VARSP26640 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 FTLP10-202ENST00000505798 471 ntBASIC14.36□□□□□ -0.11
VARSP26640 RNA5SP486-201ENST00000515961 83 ntBASIC14.36□□□□□ -0.11
VARSP26640 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 AC131206.1-201ENST00000538078 1211 ntBASIC14.36□□□□□ -0.11
VARSP26640 AC078819.1-201ENST00000547454 765 ntBASIC14.36□□□□□ -0.11
VARSP26640 AC012085.1-201ENST00000548270 765 ntBASIC14.36□□□□□ -0.11
VARSP26640 DUX4L45-201ENST00000566406 1057 ntBASIC14.36□□□□□ -0.11
VARSP26640 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.36□□□□□ -0.11
VARSP26640 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 AC009093.2-202ENST00000620513 2079 ntBASIC14.36□□□□□ -0.11
VARSP26640 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.36□□□□□ -0.11
VARSP26640 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.36□□□□□ -0.11
VARSP26640 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
VARSP26640 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VARSP26640 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VARSP26640 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VARSP26640 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
VARSP26640 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.35□□□□□ -0.11
VARSP26640 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.35□□□□□ -0.11
VARSP26640 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 KRT90P-201ENST00000549264 1064 ntBASIC14.35□□□□□ -0.11
VARSP26640 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.35□□□□□ -0.11
VARSP26640 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VARSP26640 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.35□□□□□ -0.11
VARSP26640 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VARSP26640 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.35□□□□□ -0.11
VARSP26640 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VARSP26640 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.35□□□□□ -0.11
VARSP26640 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VARSP26640 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.35□□□□□ -0.11
VARSP26640 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms