Protein–RNA interactions for Protein: P24046

GABRR1, Gamma-aminobutyric acid receptor subunit rho-1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRR1P24046 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.53□□□□□ -0.4
GABRR1P24046 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
GABRR1P24046 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
GABRR1P24046 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
GABRR1P24046 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.53□□□□□ -0.4
GABRR1P24046 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.53□□□□□ -0.4
GABRR1P24046 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
GABRR1P24046 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 AC111170.3-201ENST00000624282 2464 ntBASIC12.53□□□□□ -0.4
GABRR1P24046 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
GABRR1P24046 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
GABRR1P24046 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
GABRR1P24046 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.53□□□□□ -0.4
GABRR1P24046 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
GABRR1P24046 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.52□□□□□ -0.4
GABRR1P24046 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
GABRR1P24046 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GABRR1P24046 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
GABRR1P24046 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
GABRR1P24046 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
GABRR1P24046 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.52□□□□□ -0.41
GABRR1P24046 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.52□□□□□ -0.41
GABRR1P24046 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.52□□□□□ -0.41
GABRR1P24046 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.52□□□□□ -0.41
GABRR1P24046 AC245100.3-201ENST00000441281 285 ntBASIC12.52□□□□□ -0.41
GABRR1P24046 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC12.52□□□□□ -0.41
GABRR1P24046 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 AC007389.4-201ENST00000454674 793 ntBASIC12.52□□□□□ -0.41
GABRR1P24046 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.52□□□□□ -0.41
GABRR1P24046 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.52□□□□□ -0.41
GABRR1P24046 GCOM2-201ENST00000509133 1104 ntBASIC12.52□□□□□ -0.41
GABRR1P24046 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.52□□□□□ -0.41
GABRR1P24046 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.52□□□□□ -0.41
GABRR1P24046 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.52□□□□□ -0.41
GABRR1P24046 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.52□□□□□ -0.41
GABRR1P24046 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.52□□□□□ -0.41
GABRR1P24046 AC025048.6-201ENST00000634326 1161 ntBASIC12.52□□□□□ -0.41
GABRR1P24046 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.52□□□□□ -0.41
GABRR1P24046 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
GABRR1P24046 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 AL356585.2-201ENST00000625078 2396 ntBASIC12.52□□□□□ -0.41
GABRR1P24046 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GABRR1P24046 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms