Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB4AP20338 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB4AP20338 BCAR1-209ENST00000546196 1340 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 AL354861.3-201ENST00000600140 2412 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 DLX4-206ENST00000611342 1662 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
RAB4AP20338 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
RAB4AP20338 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
RAB4AP20338 AC002056.1-201ENST00000395613 760 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.15□□□□□ -0.62
RAB4AP20338 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
RAB4AP20338 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB4AP20338 AC009947.1-201ENST00000444350 727 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 AC022447.6-201ENST00000515522 438 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC11.15□□□□□ -0.62
RAB4AP20338 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.15□□□□□ -0.62
RAB4AP20338 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.15□□□□□ -0.62
RAB4AP20338 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.15□□□□□ -0.62
RAB4AP20338 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 AC027307.2-201ENST00000591252 911 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 AC004877.2-201ENST00000623941 599 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 FAM215A-202ENST00000632077 792 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.15□□□□□ -0.62
RAB4AP20338 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
RAB4AP20338 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
RAB4AP20338 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
RAB4AP20338 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
RAB4AP20338 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
RAB4AP20338 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.15□□□□□ -0.63
RAB4AP20338 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
RAB4AP20338 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
RAB4AP20338 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
RAB4AP20338 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 MFF-204ENST00000353339 2186 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 CICP18-201ENST00000406017 2812 ntBASIC11.14□□□□□ -0.63
RAB4AP20338 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
RAB4AP20338 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 TNRC18P1-201ENST00000502875 3650 ntBASIC11.14□□□□□ -0.63
RAB4AP20338 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.14□□□□□ -0.63
RAB4AP20338 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 AC142381.1-201ENST00000426099 345 ntBASIC11.14□□□□□ -0.63
RAB4AP20338 KRT18P67-201ENST00000432816 1264 ntBASIC11.14□□□□□ -0.63
RAB4AP20338 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.14□□□□□ -0.63
RAB4AP20338 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.14□□□□□ -0.63
RAB4AP20338 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
RAB4AP20338 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
RAB4AP20338 RARRES2P8-201ENST00000566335 367 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms