Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL2P13500 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL2P13500 MIR6074-201ENST00000612054 107 ntBASIC12.64□□□□□ -0.39
CCL2P13500 AL008638.5-201ENST00000623814 1298 ntBASIC12.64□□□□□ -0.39
CCL2P13500 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
CCL2P13500 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
CCL2P13500 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCL2P13500 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 CYP4F23P-201ENST00000593402 1579 ntBASIC12.64□□□□□ -0.39
CCL2P13500 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CCL2P13500 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL2P13500 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCL2P13500 AC144522.1-201ENST00000625111 1658 ntBASIC12.64□□□□□ -0.39
CCL2P13500 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCL2P13500 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL2P13500 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL2P13500 AC104073.2-201ENST00000453737 312 ntBASIC12.63□□□□□ -0.39
CCL2P13500 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.63□□□□□ -0.39
CCL2P13500 TUBB8P8-201ENST00000458717 1058 ntBASIC12.63□□□□□ -0.39
CCL2P13500 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL2P13500 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL2P13500 AC005586.2-201ENST00000563946 837 ntBASIC12.63□□□□□ -0.39
CCL2P13500 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 AC243960.2-201ENST00000600996 747 ntBASIC12.63□□□□□ -0.39
CCL2P13500 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
CCL2P13500 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.63□□□□□ -0.39
CCL2P13500 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL2P13500 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL2P13500 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL2P13500 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL2P13500 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
CCL2P13500 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL2P13500 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL2P13500 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL2P13500 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL2P13500 HSPA7-201ENST00000445535 1927 ntBASIC12.62□□□□□ -0.39
CCL2P13500 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL2P13500 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL2P13500 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL2P13500 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCL2P13500 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms