Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 USP17L6P-201ENST00000382470 1197 ntBASIC14.96□□□□□ -0.01
CD48P09326 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.96□□□□□ -0.01
CD48P09326 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.96□□□□□ -0.01
CD48P09326 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.96□□□□□ -0.01
CD48P09326 AC124068.2-201ENST00000569473 1109 ntBASIC14.96□□□□□ -0.01
CD48P09326 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 MIR6805-201ENST00000615055 62 ntBASIC14.96□□□□□ -0.01
CD48P09326 BAP1-211ENST00000615113 489 ntBASIC14.96□□□□□ -0.01
CD48P09326 AL096828.3-201ENST00000615354 462 ntBASIC14.96□□□□□ -0.01
CD48P09326 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CD48P09326 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CD48P09326 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CD48P09326 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.96□□□□□ -0.02
CD48P09326 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD48P09326 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD48P09326 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CD48P09326 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CD48P09326 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CD48P09326 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CD48P09326 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 LAP3P2-201ENST00000454686 1454 ntBASIC14.95□□□□□ -0.02
CD48P09326 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.95□□□□□ -0.02
CD48P09326 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CD48P09326 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.95□□□□□ -0.02
CD48P09326 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.95□□□□□ -0.02
CD48P09326 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 MTX1P1-201ENST00000440904 838 ntBASIC14.95□□□□□ -0.02
CD48P09326 AC012441.2-201ENST00000444843 739 ntBASIC14.95□□□□□ -0.02
CD48P09326 RNMTL1P1-201ENST00000454103 560 ntBASIC14.95□□□□□ -0.02
CD48P09326 RPL13AP20-201ENST00000459725 609 ntBASIC14.95□□□□□ -0.02
CD48P09326 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 AC003686.1-201ENST00000550956 1034 ntBASIC14.95□□□□□ -0.02
CD48P09326 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.95□□□□□ -0.02
CD48P09326 AC009884.2-201ENST00000603110 324 ntBASIC14.95□□□□□ -0.02
CD48P09326 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.95□□□□□ -0.02
CD48P09326 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CD48P09326 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.95□□□□□ -0.02
CD48P09326 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CD48P09326 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CD48P09326 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CD48P09326 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.94□□□□□ -0.02
CD48P09326 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.94□□□□□ -0.02
CD48P09326 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.94□□□□□ -0.02
CD48P09326 AC107918.4-201ENST00000641966 3141 ntBASIC14.94□□□□□ -0.02
CD48P09326 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CD48P09326 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms