Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CSF1RP07333 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
CSF1RP07333 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.49■□□□□ 0.39
CSF1RP07333 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.49■□□□□ 0.39
CSF1RP07333 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.49■□□□□ 0.39
CSF1RP07333 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 AC092573.1-201ENST00000433054 884 ntBASIC17.49■□□□□ 0.39
CSF1RP07333 RPL35P9-201ENST00000446059 350 ntBASIC17.49■□□□□ 0.39
CSF1RP07333 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.49■□□□□ 0.39
CSF1RP07333 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.49■□□□□ 0.39
CSF1RP07333 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.49■□□□□ 0.39
CSF1RP07333 AP005264.5-201ENST00000590066 467 ntBASIC17.49■□□□□ 0.39
CSF1RP07333 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC17.49■□□□□ 0.39
CSF1RP07333 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC17.49■□□□□ 0.39
CSF1RP07333 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CSF1RP07333 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.49■□□□□ 0.39
CSF1RP07333 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSF1RP07333 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC17.49■□□□□ 0.39
CSF1RP07333 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CSF1RP07333 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC17.48■□□□□ 0.39
CSF1RP07333 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.48■□□□□ 0.39
CSF1RP07333 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CSF1RP07333 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1RP07333 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CSF1RP07333 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 BAK1P1-201ENST00000317045 636 ntBASIC17.48■□□□□ 0.39
CSF1RP07333 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.48■□□□□ 0.39
CSF1RP07333 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.48■□□□□ 0.39
CSF1RP07333 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.48■□□□□ 0.39
CSF1RP07333 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1RP07333 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1RP07333 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.48■□□□□ 0.39
CSF1RP07333 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1RP07333 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.48■□□□□ 0.39
CSF1RP07333 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 AL009176.1-201ENST00000607876 650 ntBASIC17.48■□□□□ 0.39
CSF1RP07333 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.48■□□□□ 0.39
CSF1RP07333 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CSF1RP07333 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 AC004554.1-201ENST00000422830 1468 ntBASIC17.48■□□□□ 0.39
CSF1RP07333 AC025183.3-201ENST00000623526 1482 ntBASIC17.48■□□□□ 0.39
CSF1RP07333 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.48■□□□□ 0.39
CSF1RP07333 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.48■□□□□ 0.39
CSF1RP07333 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 AC007686.3-201ENST00000619017 3487 ntBASIC17.48■□□□□ 0.39
CSF1RP07333 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSF1RP07333 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1RP07333 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1RP07333 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CSF1RP07333 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.47■□□□□ 0.39
CSF1RP07333 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1RP07333 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CSF1RP07333 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CSF1RP07333 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CSF1RP07333 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSF1RP07333 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.47■□□□□ 0.39
CSF1RP07333 OR52M2P-201ENST00000414298 959 ntBASIC17.47■□□□□ 0.39
CSF1RP07333 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.47■□□□□ 0.39
CSF1RP07333 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.47■□□□□ 0.39
CSF1RP07333 STK24P1-201ENST00000455035 1291 ntBASIC17.47■□□□□ 0.39
CSF1RP07333 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.47■□□□□ 0.39
CSF1RP07333 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.47■□□□□ 0.39
CSF1RP07333 RNA5SP406-201ENST00000516106 112 ntBASIC17.47■□□□□ 0.39
CSF1RP07333 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms