Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VTNP04004 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VTNP04004 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
VTNP04004 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VTNP04004 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.75■□□□□ 0.11
VTNP04004 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
VTNP04004 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VTNP04004 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.74■□□□□ 0.11
VTNP04004 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.74■□□□□ 0.11
VTNP04004 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
VTNP04004 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.74■□□□□ 0.11
VTNP04004 AC253536.4-201ENST00000440539 267 ntBASIC15.74■□□□□ 0.11
VTNP04004 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 AC130709.1-201ENST00000484779 1212 ntBASIC15.74■□□□□ 0.11
VTNP04004 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.74■□□□□ 0.11
VTNP04004 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 AC087392.5-201ENST00000612517 489 ntBASIC15.74■□□□□ 0.11
VTNP04004 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
VTNP04004 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.74■□□□□ 0.11
VTNP04004 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 AC126755.1-201ENST00000525846 6405 ntBASIC15.74■□□□□ 0.11
VTNP04004 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
VTNP04004 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.74■□□□□ 0.11
VTNP04004 AL591122.2-201ENST00000624125 1853 ntBASIC15.74■□□□□ 0.11
VTNP04004 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.74■□□□□ 0.11
VTNP04004 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
VTNP04004 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.73■□□□□ 0.11
VTNP04004 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VTNP04004 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VTNP04004 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.73■□□□□ 0.11
VTNP04004 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VTNP04004 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 Z69890.1-201ENST00000382990 339 ntBASIC15.73■□□□□ 0.11
VTNP04004 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.73■□□□□ 0.11
VTNP04004 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.73■□□□□ 0.11
VTNP04004 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.73■□□□□ 0.11
VTNP04004 RPL7P35-201ENST00000446943 740 ntBASIC15.73■□□□□ 0.11
VTNP04004 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 RN7SL8P-201ENST00000461771 266 ntBASIC15.73■□□□□ 0.11
VTNP04004 RPL18AP8-201ENST00000486071 528 ntBASIC15.73■□□□□ 0.11
VTNP04004 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC15.73■□□□□ 0.11
VTNP04004 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.73■□□□□ 0.11
VTNP04004 AC025262.2-201ENST00000623975 1056 ntBASIC15.73■□□□□ 0.11
VTNP04004 AP001184.1-201ENST00000637936 376 ntBASIC15.73■□□□□ 0.11
VTNP04004 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
VTNP04004 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.73■□□□□ 0.11
VTNP04004 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.73■□□□□ 0.11
VTNP04004 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VTNP04004 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.73■□□□□ 0.11
VTNP04004 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.73■□□□□ 0.11
VTNP04004 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VTNP04004 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
VTNP04004 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.72■□□□□ 0.11
VTNP04004 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.72■□□□□ 0.11
VTNP04004 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VTNP04004 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.72■□□□□ 0.11
VTNP04004 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VTNP04004 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms