Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
APOC1P02654 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 INE2-201ENST00000630399 1874 ntBASIC12.89□□□□□ -0.35
APOC1P02654 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
APOC1P02654 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.89□□□□□ -0.35
APOC1P02654 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.89□□□□□ -0.35
APOC1P02654 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
APOC1P02654 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.89□□□□□ -0.35
APOC1P02654 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
APOC1P02654 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.89□□□□□ -0.35
APOC1P02654 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.89□□□□□ -0.35
APOC1P02654 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.89□□□□□ -0.35
APOC1P02654 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.89□□□□□ -0.35
APOC1P02654 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.89□□□□□ -0.35
APOC1P02654 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.89□□□□□ -0.35
APOC1P02654 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC1P02654 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
APOC1P02654 AP001002.3-201ENST00000623482 206 ntBASIC12.89□□□□□ -0.35
APOC1P02654 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC1P02654 AL358472.5-202ENST00000641448 1267 ntBASIC12.89□□□□□ -0.35
APOC1P02654 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.89□□□□□ -0.35
APOC1P02654 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 AL138709.1-201ENST00000614840 1693 ntBASIC12.89□□□□□ -0.35
APOC1P02654 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
APOC1P02654 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.89□□□□□ -0.35
APOC1P02654 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.88□□□□□ -0.35
APOC1P02654 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.88□□□□□ -0.35
APOC1P02654 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
APOC1P02654 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.88□□□□□ -0.35
APOC1P02654 CD8B2-202ENST00000417670 633 ntBASIC12.88□□□□□ -0.35
APOC1P02654 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.88□□□□□ -0.35
APOC1P02654 AL035414.1-201ENST00000451327 857 ntBASIC12.88□□□□□ -0.35
APOC1P02654 RN7SL752P-201ENST00000463779 287 ntBASIC12.88□□□□□ -0.35
APOC1P02654 RNA5SP486-201ENST00000515961 83 ntBASIC12.88□□□□□ -0.35
APOC1P02654 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.88□□□□□ -0.35
APOC1P02654 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.88□□□□□ -0.35
APOC1P02654 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms