Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 LINC02486-201ENST00000604157 3000 ntBASIC11.19□□□□□ -0.62
TRBV12-3P01733 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC018629.1-201ENST00000623381 1736 ntBASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 KRT18P36-201ENST00000411618 1276 ntBASIC11.19□□□□□ -0.62
TRBV12-3P01733 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC004898.1-201ENST00000451057 766 ntBASIC11.19□□□□□ -0.62
TRBV12-3P01733 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 OARD1-212ENST00000482515 832 ntTSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC013355.1-201ENST00000562625 723 ntBASIC11.19□□□□□ -0.62
TRBV12-3P01733 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC092299.1-201ENST00000632679 757 ntBASIC11.19□□□□□ -0.62
TRBV12-3P01733 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 AC016397.2-201ENST00000624848 1985 ntBASIC11.19□□□□□ -0.62
TRBV12-3P01733 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.19□□□□□ -0.62
TRBV12-3P01733 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 OR2R1P-201ENST00000441404 914 ntBASIC11.18□□□□□ -0.62
TRBV12-3P01733 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 ST13P19-201ENST00000442505 1124 ntBASIC11.18□□□□□ -0.62
TRBV12-3P01733 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 AC003686.1-201ENST00000550956 1034 ntBASIC11.18□□□□□ -0.62
TRBV12-3P01733 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 AC124068.2-201ENST00000569473 1109 ntBASIC11.18□□□□□ -0.62
TRBV12-3P01733 SNORD3B-2-202ENST00000571722 791 ntBASIC11.18□□□□□ -0.62
TRBV12-3P01733 MIR4525-201ENST00000580000 75 ntBASIC11.18□□□□□ -0.62
TRBV12-3P01733 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 NAT9-222ENST00000583476 583 ntTSL 3 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
TRBV12-3P01733 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC11.18□□□□□ -0.62
TRBV12-3P01733 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms