Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 MIR6775-201ENST00000617557 69 ntBASIC14.6□□□□□ -0.07
GPC4O75487 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GPC4O75487 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
GPC4O75487 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.6□□□□□ -0.07
GPC4O75487 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
GPC4O75487 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
GPC4O75487 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
GPC4O75487 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC14.6□□□□□ -0.07
GPC4O75487 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 AL354989.2-201ENST00000435838 1540 ntBASIC14.6□□□□□ -0.07
GPC4O75487 MRPL37P1-201ENST00000592451 1337 ntBASIC14.6□□□□□ -0.07
GPC4O75487 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
GPC4O75487 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GPC4O75487 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GPC4O75487 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
GPC4O75487 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
GPC4O75487 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 COX5BP1-201ENST00000507622 393 ntBASIC14.59□□□□□ -0.07
GPC4O75487 AC104989.1-201ENST00000519711 778 ntBASIC14.59□□□□□ -0.07
GPC4O75487 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.59□□□□□ -0.07
GPC4O75487 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.59□□□□□ -0.07
GPC4O75487 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.59□□□□□ -0.07
GPC4O75487 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 AC008687.7-202ENST00000637404 953 ntBASIC14.59□□□□□ -0.07
GPC4O75487 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
GPC4O75487 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.59□□□□□ -0.07
GPC4O75487 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
GPC4O75487 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
GPC4O75487 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
GPC4O75487 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
GPC4O75487 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
GPC4O75487 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
GPC4O75487 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.58□□□□□ -0.07
GPC4O75487 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
GPC4O75487 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
GPC4O75487 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
GPC4O75487 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
GPC4O75487 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.58□□□□□ -0.08
GPC4O75487 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.58□□□□□ -0.08
GPC4O75487 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.58□□□□□ -0.08
GPC4O75487 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
GPC4O75487 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 AC022210.1-201ENST00000449856 793 ntBASIC14.58□□□□□ -0.08
GPC4O75487 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
GPC4O75487 AC119751.2-201ENST00000504529 210 ntBASIC14.58□□□□□ -0.08
GPC4O75487 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.58□□□□□ -0.08
GPC4O75487 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms