Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
CCDC188H7C350 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.06■□□□□ 0
CCDC188H7C350 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.06■□□□□ 0
CCDC188H7C350 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.06■□□□□ 0
CCDC188H7C350 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 AC009486.1-201ENST00000569860 813 ntBASIC15.06■□□□□ 0
CCDC188H7C350 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
CCDC188H7C350 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.06■□□□□ 0
CCDC188H7C350 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.06■□□□□ 0
CCDC188H7C350 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC15.06■□□□□ 0
CCDC188H7C350 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC188H7C350 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC188H7C350 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CCDC188H7C350 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CCDC188H7C350 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
CCDC188H7C350 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC15.05■□□□□ 0
CCDC188H7C350 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC15.05■□□□□ 0
CCDC188H7C350 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.05■□□□□ -0
CCDC188H7C350 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 AL162726.2-201ENST00000438986 1017 ntBASIC15.05■□□□□ -0
CCDC188H7C350 AL035414.1-201ENST00000451327 857 ntBASIC15.05■□□□□ -0
CCDC188H7C350 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.05■□□□□ -0
CCDC188H7C350 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.05■□□□□ -0
CCDC188H7C350 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.05■□□□□ -0
CCDC188H7C350 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
CCDC188H7C350 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
CCDC188H7C350 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.05■□□□□ -0
CCDC188H7C350 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.05■□□□□ -0
CCDC188H7C350 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CCDC188H7C350 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.05■□□□□ -0
CCDC188H7C350 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC188H7C350 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.05■□□□□ -0
CCDC188H7C350 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.05■□□□□ -0
CCDC188H7C350 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.05■□□□□ -0
CCDC188H7C350 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
CCDC188H7C350 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CCDC188H7C350 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.05■□□□□ -0
CCDC188H7C350 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.05■□□□□ -0
CCDC188H7C350 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CCDC188H7C350 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
CCDC188H7C350 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 MEX3B-202ENST00000558133 4333 ntBASIC15.04■□□□□ -0
CCDC188H7C350 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.04■□□□□ -0
CCDC188H7C350 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
CCDC188H7C350 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 AL391825.1-201ENST00000457671 1364 ntBASIC15.04■□□□□ -0
CCDC188H7C350 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.04■□□□□ -0
CCDC188H7C350 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCDC188H7C350 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.04■□□□□ -0
CCDC188H7C350 AC098850.1-201ENST00000419919 790 ntBASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms