Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 OR52M2P-201ENST00000414298 959 ntBASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 KRT19P4-201ENST00000443208 943 ntBASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 RN7SKP155-201ENST00000516031 288 ntBASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 AC145285.5-201ENST00000562217 361 ntBASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 AC132812.1-201ENST00000583145 892 ntBASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 AC138761.6-201ENST00000583997 1423 ntBASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
C1QTNF9BB2RNN3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AC023090.2-201ENST00000625182 2110 ntBASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 RN7SL363P-201ENST00000482412 273 ntBASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 DERL2-206ENST00000572834 589 ntTSL 3 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.43□□□□□ -0.26
C1QTNF9BB2RNN3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms