Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 VDAC1P7-201ENST00000462417 847 ntBASIC15.8■□□□□ 0.12
CCDC66A2RUB6 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 AC004890.2-204ENST00000481968 304 ntBASIC15.8■□□□□ 0.12
CCDC66A2RUB6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 AL390754.1-201ENST00000619088 582 ntBASIC15.8■□□□□ 0.12
CCDC66A2RUB6 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC66A2RUB6 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 GOLGA2P5-201ENST00000266746 2395 ntBASIC15.79■□□□□ 0.12
CCDC66A2RUB6 FAM90A12P-201ENST00000519497 2375 ntBASIC15.79■□□□□ 0.12
CCDC66A2RUB6 FAM90A24P-201ENST00000520792 2369 ntBASIC15.79■□□□□ 0.12
CCDC66A2RUB6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 FP325330.2-201ENST00000624219 5630 ntBASIC15.79■□□□□ 0.12
CCDC66A2RUB6 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 CYMP-203ENST00000474680 1263 ntBASIC15.79■□□□□ 0.12
CCDC66A2RUB6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 DUX4L47-201ENST00000566374 394 ntBASIC15.79■□□□□ 0.12
CCDC66A2RUB6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 BX539320.1-201ENST00000623759 877 ntBASIC15.79■□□□□ 0.12
CCDC66A2RUB6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC66A2RUB6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 KRT8P14-201ENST00000414254 1442 ntBASIC15.78■□□□□ 0.12
CCDC66A2RUB6 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC66A2RUB6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms