Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 STK16-203ENST00000409516 895 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 SCARNA12-201ENST00000459155 270 ntBASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 RN7SL23P-201ENST00000484055 275 ntBASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AC011247.3-201ENST00000603297 438 ntBASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AC006158.1-201ENST00000610661 249 ntBASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AC011471.3-201ENST00000623576 402 ntBASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 AC021305.1-201ENST00000520656 1514 ntBASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CCDC187A0A096LP49 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AL591122.2-201ENST00000624125 1853 ntBASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AC006987.1-201ENST00000413610 527 ntBASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 RN7SL767P-201ENST00000493013 295 ntBASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AC226150.1-201ENST00000544259 466 ntBASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 NDUFB10P1-201ENST00000567319 521 ntBASIC13.62□□□□□ -0.23
CCDC187A0A096LP49 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms