Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AL136309.1-201ENST00000403917 691 ntBASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AC005034.1-201ENST00000426657 489 ntBASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 RPL7P3-201ENST00000441388 714 ntBASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 COX5BP1-201ENST00000507622 393 ntBASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AC079316.1-201ENST00000548397 411 ntBASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 RN7SL713P-201ENST00000582127 302 ntBASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 USP3-204ENST00000540797 5474 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 Z82170.1-201ENST00000625081 3192 ntBASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 AP001267.2-201ENST00000532619 2086 ntBASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
HLA-DRB4X5D2U9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 PUDPP3-201ENST00000445368 636 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 KLF2P4-201ENST00000451959 1225 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 TMEM198B-204ENST00000484016 896 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 KRT17P8-201ENST00000540749 863 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 RAB43P1-201ENST00000561790 589 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 ZACNP1-201ENST00000612259 710 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AP001002.3-201ENST00000623482 206 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AL035252.4-201ENST00000624174 288 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AC002472.3-201ENST00000640124 621 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AHCYP2-201ENST00000430630 1300 ntBASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms