Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 MIR4750-201ENST00000584564 56 ntBASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 AC104506.1-201ENST00000609247 429 ntBASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 AL136295.7-201ENST00000619226 1200 ntBASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 AC091812.3-201ENST00000621362 345 ntBASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 CU633904.3-201ENST00000624042 1029 ntBASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 HLA-C-210ENST00000640219 976 ntBASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAI2Q9Y5P3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 HSPA8P5-201ENST00000456928 2069 ntBASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AC027601.5-201ENST00000624065 2482 ntBASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AC124068.2-201ENST00000569473 1109 ntBASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 SNORD3B-2-202ENST00000571722 791 ntBASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AC117489.1-201ENST00000625169 3217 ntBASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 LINC01230-201ENST00000625222 3017 ntBASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.65□□□□□ -0.06
RAI2Q9Y5P3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 AC020910.6-201ENST00000623084 1459 ntBASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 AL133466.1-201ENST00000447582 150 ntBASIC14.64□□□□□ -0.07
RAI2Q9Y5P3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms