Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AL139094.1-201ENST00000405549 1188 ntBASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AC026410.3-201ENST00000514280 936 ntBASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AC107373.2-201ENST00000607735 490 ntBASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AC019294.4-201ENST00000561777 2905 ntBASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 AC083964.2-201ENST00000623988 2396 ntBASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
KCNIP3Q9Y2W7 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AC023141.5-201ENST00000458585 616 ntBASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AL512356.2-201ENST00000546955 174 ntBASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AC092337.1-201ENST00000568699 1129 ntBASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 KRT18P8-201ENST00000581937 1246 ntBASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms