Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RN7SL277P-201ENST00000481521 288 ntBASIC14.31□□□□□ -0.12
NCDNQ9UBB6 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 AC090136.2-201ENST00000517809 420 ntBASIC14.31□□□□□ -0.12
NCDNQ9UBB6 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 AC018846.1-201ENST00000568231 183 ntBASIC14.31□□□□□ -0.12
NCDNQ9UBB6 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 AC138035.3-201ENST00000622706 2791 ntBASIC14.31□□□□□ -0.12
NCDNQ9UBB6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 REXO1L4P-201ENST00000605109 1937 ntBASIC14.31□□□□□ -0.12
NCDNQ9UBB6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NCDNQ9UBB6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 GCOM2-201ENST00000509133 1104 ntBASIC14.3□□□□□ -0.12
NCDNQ9UBB6 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 RN7SL121P-201ENST00000584223 273 ntBASIC14.3□□□□□ -0.12
NCDNQ9UBB6 AL160191.2-201ENST00000603975 601 ntBASIC14.3□□□□□ -0.12
NCDNQ9UBB6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NCDNQ9UBB6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NCDNQ9UBB6 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 232.4 ms